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Dissecting and aligning the regulatory and effector mechanisms shaping murine M2 macrophages
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List of publications |
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Horvath Attila, Daniel Bence, Szeles Lajos, Cuaranta-Monroy Ixchelt, Czimmerer Zsolt, Ozgyin Lilla, Steiner Laszlo, Kiss Mate, Simandi Zoltan, Poliska Szilard, Giannakis Nikolas, Raineri Emanuele, Gut Ivo G, Nagy Benedek, Nagy Laszlo: Labelled regulatory elements are pervasive features of the macrophage genome and are dynamically utilized by classical and alternative polarization signals, NUCLEIC ACIDS RESEARCH 47: (6) pp. 2778-2792., 2019 | Czimmerer Z, Horvath A, Daniel B, Nagy G, Cuaranta-Monroy I, Kiss M, Kolostyak Z, Poliska S, Steiner L, Giannakis N, Varga T, Nagy L: Dynamic transcriptional control of macrophage miRNA signature via inflammation responsive enhancers revealed using a combination of next generation sequencing-based approaches., BIOCHIM BIOPHYS ACTA x: x, 2017 | Czimmerer Z, Nagy ZS, Nagy G, Horvath A, Silye-Cseh T, Kriston A, Jonas D, Sauer S, Steiner L, Daniel B, Deleuze JF, Nagy L: Extensive and functional overlap of the STAT6 and RXR cistromes in the active enhancer repertoire of human CD14+ monocyte derived differentiating macrophages., MOL CELL ENDOCRINOL 63: (4) 647-661, 2017 | Kiss M, Czimmerer Z, Nagy G, Bieniasz-Krzywiec P, Ehling M, Pap A, Poliska S, Botof P, Tzerpos P, Horvath A, Kolostyak Z, Daniel B, Szatmari I, Mazzone M, Nagy L: Retinoid X receptor suppresses a metastasis-promoting transcriptional program in myeloid cells via a ligand-insensitive mechanism, P NATL ACAD SCI USA 114: (40) 10725-10730, 2017 | Patsalos Andreas, Pap Attila, Varga Tamas, Trencsenyi Gyorgy, Contreras Gerardo Alvarado, Garai Ildiko, Papp Zoltan, Dezso Balazs, Pintye Eva, Nagy Laszlo: In situ macrophage phenotypic transition is affected by altered cellular composition prior to acute sterile muscle injury, J PHYSIOL-LONDON 595: (17) 5815-5842, 2017 | Simandi Z, Horvath A, Cuaranta-Monroy I, Sauer S, Deleuze JF, Nagy L: RXR heterodimers orchestrate transcriptional control of neurogenesis and cell fate specification., MOL CELL ENDOCRINOL x: x, 2017 | Andreas Patsalos, Zoltan Simandi, Tristan T. Hays, Matthew Peloquin, Matine Hajian, Isabella Restrepo, Paul M. Coen, Alan J. Russell, Laszlo Nagy: In vivo GDF3 administration abrogates aging related muscle regeneration delay following acute sterile injury, AGING CELL 17 : 5 Paper: e12815, 2018 | Bence Daniel,Gergely Nagy, Zsolt Czimmerer, Attila Horvath, David W.Hammers, Ixchelt Cuaranta-Monroy, Szilard Poliska, Petros Tzerpos, Zsuzsanna Kolostyak, Tristan T.Hays, Andreas Patsalos, René Houtman, Sascha Sauer, Jean Francois-Deleuze, Fraydoon Rastinejad, Balint L.Balint, Lee Sweeney, Laszlo Nagy: The Nuclear Receptor PPARγ Controls Progressive Macrophage Polarization as a Ligand-Insensitive Epigenomic Ratchet of Transcriptional Memory, Immunity 49: (4) pp. 615-626, 2018 | Czimmerer Z, Daniel B, Horvath A, Ruckerl D, Nagy G, Kiss M, Peloquin M, Budai MM, Cuaranta-Monroy I, Simandi Z, Steiner L, Nagy B Jr, Poliska S, Banko C, Bacso Z, Schulman IG, Sauer S, Deleuze JF, Allen JE, Benko S, Nagy L: The Transcription Factor STAT6 Mediates Direct Repression of Inflammatory Enhancers and Limits Activation of Alternatively Polarized Macrophages., IMMUNITY 48: (1) pp. 75-90., 2018 | Daniel B, Nagy G, Horvath A, Czimmerer Z, Cuaranta-Monroy I, Poliska S, Hays TT, Sauer S, Francois-Deleuze J, Nagy L: The IL-4/STAT6/PPARgamma signaling axis is driving the expansion of the RXR heterodimer cistrome, providing complex ligand responsiveness in macrophages, NUCLEIC ACIDS RES 46: (9) pp. 4425-4439., 2018 | Zsolt Czimmerer, Attila Horvath, Bence Daniel, Gergely Nagy, Ixchelt Cuaranta-Monroy, Mate Kiss, Zsuzsanna Kolostyak, Szilard Poliska, Laszlo Steiner, Nikolas Giannakis, Tamas Varga, Laszlo Nagy: Dynamic transcriptional control of macrophage miRNA signature via inflammation responsive enhancers revealed using a combination of next generation sequencing-based appro, Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms 1861 pp. 14-28., 2018 | Zsolt Czimmerer, Zsuzsanna S.Nagy, Gergely Nagy, Attila Horvath, Timea Silye-Cseh, Agnes Kriston, David Jonas, Sascha Sauer, Laszlo Steiner, Bence Daniel, Jean-Francois Deleuze, Laszlo Nagy: Extensive and functional overlap of the STAT6 and RXR cistromes in the active enhancer repertoire of human CD14+ monocyte derived differentiating macrophages, Molecular and Cellular Endocrinology (471): 63-74., 2018 | Tamas Varga, Rémi Mounier, Attila Horváth, Sylvain Cuvellier, Florent Dumont, Szilárd Póliska, Hamida Ardjoune, Gaëtan Juban, László Nagy, Bénédicte Chazaud: Highly dynamic transcriptional signature of distinct macrophage subsets during sterile inflammation, resolution, and tissue repair, J IMMUNOL 196: (11) 4771-4782, 2016 | Czimmerer Z, Varga T, Kiss M, Ovando Vázquez C, Doan-Xuan QM, Rückerl D, Tattikota SG, Yan X, S Nagy Z, Daniel B, Poliska S, Horvath A, Nagy G, Varallyay E, Poy MN, Allen JA, Bacso Z, Abreu-Goodger C, Nagy L: The IL4-STAT6 signaling axis establishes a conserved microRNA signature in human and mouse macrophages regulating cell survival via miR-342-3p, GENOME MED 8: (1) 63, 2016 | Simandi Z, Horvath A, Nagy G P, Nagy L: Prediction and Validation of Gene Regulatory Elements Activated During Retinoic Acid Induced Embryonic Stem Cell Differentiation, JOVE-J VIS EXP :, 2016 | Attila Pap, Ixchelt Cuaranta-Monroy, Matt Peloquin, László Nagy: Is the Mouse a Good Model of Human PPARγ-Related Metabolic Diseases?, INT J MOL SCI 17: (8), 2016 | Simandi Z, Horvath A, Wright L C, Cuaranta-Monroy I, De Luca I, Karolyi K, Sauer S, Deleuze JF, Gudas L J, Cowley S M, Nagy L: Oct4 acts as an integrator of pluripotency and signal-induced differentiation, MOL CELL 63: 647-661, 2016 | Tamas Varga, Remi Mounier, Andreas Patsalos, Peter Gogolak, Matthew Peloquin, Attila Horvath, Attila Pap, Bence Daniel, Gergely Nagy, Eva Pintye, Szilard Poliska, Sylvain Cuvellier, Sabrina Ben Larbi, Brian E Sansbury, Matthew Spite, Chester W Brown, Benedicte Chazaud, Laszlo Nagy: Macrophage PPARg , a Lipid Activated Transcription Factor Controls the Growth Factor GDF3 and Skeletal Muscle Regeneration, IMMUNITY 45: 1038-1051, 2016 | Patsalos Andreas, Pap Attila, Varga Tamas, Trencsenyi Gyorgy, Contreras Gerardo Alvarado, Garai Ildiko, Papp Zoltan, Dezso Balazs, Pintye Eva, Nagy Laszlo: In situ macrophage phenotypic transition is affected by altered cellular composition prior to acute sterile muscle injury, J PHYSIOL-LONDON 595: (17) 5815-5842, 2017 | Kiss M, Czimmerer Z, Nagy G, Bieniasz-Krzywiec P, Ehling M, Pap A, Poliska S, Botof P, Tzerpos P, Horvath A, Kolostyak Z, Daniel B, Szatmari I, Mazzone M, Nagy L: Retinoid X receptor suppresses a metastasis-promoting transcriptional program in myeloid cells via a ligand-insensitive mechanism, P NATL ACAD SCI USA 114: (40) 10725-10730, 2017 | Czimmerer Z, Horvath A, Daniel B, Nagy G, Cuaranta-Monroy I, Kiss M, Kolostyak Z, Poliska S, Steiner L, Giannakis N, Varga T, Nagy L: Dynamic transcriptional control of macrophage miRNA signature via inflammation responsive enhancers revealed using a combination of next generation sequencing-based approaches., BIOCHIM BIOPHYS ACTA x: x, 2017 | Simandi Z, Horvath A, Cuaranta-Monroy I, Sauer S, Deleuze JF, Nagy L: RXR heterodimers orchestrate transcriptional control of neurogenesis and cell fate specification., MOL CELL ENDOCRINOL x: x, 2017 | Attila Pap, Ixchelt Cuaranta-Monroy, Matt Peloquin, László Nagy: Is the Mouse a Good Model of Human PPARγ-Related Metabolic Diseases?, INT J MOL SCI 17: (8) , 2016 | Dozsa A, Mihaly J, Dezso B, Csizmadia E, Keresztessy T, Marko L, Rühl R, Remenyik E, Nagy L: Decreased peroxisome proliferator-activated receptor y level and signalling in sebaceous glands of patients with acne vulgaris, CLIN EXP DERMATOL 41: (5) 547-551, 2016 | Kiss M, Nagy L: Nuclear Receptors in Immune Function, In: Michael J H Ratcliffe (szerk.) (szerk.) Encyclopedia of Immunobiology: Volume 3: Activation of the Immune System. Oxford: Elsevier, 2016. pp. 145-156., 2016 | Nagy G, Czipa E, Steiner L, Nagy T, Pongor S, Nagy L, Barta E: Motif oriented high-resolution analysis of ChIP-seq data reveals the topological order of CTCF and cohesin proteins on DNA., BMC GENOMICS 17: (1) , 2016 | Simandi Z, Horvath A, Nagy G P, Nagy L: Prediction and Validation of Gene Regulatory Elements Activated During Retinoic Acid Induced Embryonic Stem Cell Differentiation, JOVE-J VIS EXP : , 2016 | Simandi Z, Horvath A, Wright L C, Cuaranta-Monroy I, De Luca I, Karolyi K, Sauer S, Deleuze JF, Gudas L J, Cowley S M, Nagy L: Oct4 acts as an integrator of pluripotency and signal-induced differentiation, MOL CELL 63: 647-661, 2016 | Tamas Varga, Remi Mounier, Andreas Patsalos, Peter Gogolak, Matthew Peloquin, Attila Horvath, Attila Pap, Bence Daniel, Gergely Nagy, Eva Pintye, Szilard Poliska, Sylvain Cuvellier, Sabrina Ben Larbi, Brian E Sansbury, Matthew Spite, Chester W Brown, Benedicte Chazaud, Laszlo Nagy: Macrophage PPARg , a Lipid Activated Transcription Factor Controls the Growth Factor GDF3 and Skeletal Muscle Regeneration, IMMUNITY 45: 1038-1051, 2016 | Tamas Varga, Rémi Mounier, Attila Horváth, Sylvain Cuvellier, Florent Dumont, Szilárd Póliska, Hamida Ardjoune, Gaëtan Juban, László Nagy, Bénédicte Chazaud: Highly dynamic transcriptional signature of distinct macrophage subsets during sterile inflammation, resolution, and tissue repair, J IMMUNOL 196: (11) 4771-4782, 2016 | Czimmerer Z, Varga T, Kiss M, Ovando Vázquez C, Doan-Xuan QM, Rückerl D, Tattikota SG, Yan X, S Nagy Z, Daniel B, Poliska S, Horvath A, Nagy G, Varallyay E, Poy MN, Allen JA, Bacso Z, Abreu-Goodger C, Nagy L: The IL4-STAT6 signaling axis establishes a conserved microRNA signature in human and mouse macrophages regulating cell survival via miR-342-3p, GENOME MED 8: (1) 63, 2016 |
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